What are the best and most used analysis tool actually, for SNP and indel calling of pooled data?
I'm using: GATK Freebayes that have specified options for data in pool.
Now I have found CRISP.
Are there others and good tool that I ignore ?
thanks!
What are the best and most used analysis tool actually, for SNP and indel calling of pooled data?
I'm using: GATK Freebayes that have specified options for data in pool.
Now I have found CRISP.
Are there others and good tool that I ignore ?
thanks!